SESAR will co-host a workshop “Vive les Samples! Geosample data management and visualization for the discerning geochemist!” at the Goldschmidt Conference in Barcelona on August 18th from 8:30 am – 12:30 pm. Please register here.

This workshop will be of interest to all geochemists who collect samples and have an interest in extending the impact of their samples. Presentations and discussion will focus on:

learning how to register samples with a unique and persistent identifier and connecting them to data publications and datasets;

best practices for keeping samples safe and accessible for the long term;

easy-to-implement techniques to effectively communicate through visualization the rich information resource your samples represent;

identifying relevant institutional repositories for your sample data;

how professional organizations and publishers are facilitating information connectivity and responsible sample management;

demonstrating how sample management can serve as a basis for a great Data Management Plan;

SESAR² Workshop at Goldschmidt 2019

This newsletter summarizes new features and improvements in the System for Earth Sample Registration (SESAR²). Click on the links below for more detailed information.

13,233 samples have been registered in SESAR² since February 2019. Browse the complete SESAR² catalog with more than 4.3 million samples.

Don’t forget to check out our help page for information and tutorials about using SESAR² to register, update, and manage your samples.

Most popular sample types and materials of samples registered in SESAR² from February 1 - May 1, 2019.

SESAR² will co-host a workshop “Vive les Samples! Geosample data management and visualization for the discerning geochemist!” at the Goldschmidt Conference in Barcelona on August 18th from 8:30-12:30. This workshop will be of interest to all geochemists who collect samples and have an interest in extending the impact of their samples. Please register here.

EarthChem and SESAR² presented at the CZIMEA Toolkit workshop, an EarthCube cyberinfrastructure training and tool assessment workshop which aims to bring together tool developers and early career Critical Zone scientists.

Gonzalez et al., 2019, Characterization of soil profiles and elemental concentrations reveals deposition of heavy metals and phosphorus in a Chicago-area nature preserve, Gensburg Markham Prairie. doi: 10.1007/s11368-019-02315-5.Check out the Gensburg Markham Prairie site and related samples in SESAR². Characterization and elemental analyses of soil cores are also published in the EarthChem Library.

Barnes et al., 2019, The role of the upper plate in controlling fluid-mobile element (Cl, Li, B) cycling through subduction zones: Hikurangi forearc, New Zealand. doi: 10.1130/GES02057.1.Click here to browse the spring water samples from the Hikurangi subduction zone in SESAR².

Giguet-covex et al., 2019, New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality. doi: 10.31223/osf.io/cnh3r.Check out the core samples and sections in SESAR².

SESAR² Newsletter | May 2019

This newsletter summarizes new improvements and features in the System for Earth Sample Registration (SESAR²) as well as recent outreach and user highlights. Click on the links below for more detailed information.

Since November 5,011 samples were registered in SESAR². Browse the complete SESAR² catalog with more than 4.3 million samples.

SESAR² v.7.2.2 was released in November 2018. This new version introduced improved validation and new functionality for the Sub-Object Type and Classification fields and implemented a new version (4.0) of web service schema. See more release notes here.

The SESAR² team attended the AGU Fall Meeting held in Washington D.C from December 10-14, 2018. See more information below about our presentations at AGU, which included presentations about the IGSN and SESAR² and participation in a town hall regarding geochemical data standards. If you were not able to catch up with us at AGU, contact us at info@54.224.199.193 with questions or comments about our resources.IGSN: Toward a Mature and Generic Persistent Identifier for Samples: This presentation discussed the evolution of the IGSN and our efforts to redesign and improve its existing organization and technical architecture. Slides from this talk can be found here.Increasing the Impact of Your Research by Enabling Persistently FAIR Physical Samples: The System for Earth Sample Registration (SESAR²): This poster discussed the benefits of using IGSNs and SESAR², and how SESAR² has grown beyond individual investigators to include repositories, museums, and many large-scale scientific initiatives.Building a Global Network of Geochemical Data: This townhall discussed developing geochemical data standards in the Earth Sciences (and the IGSN as an existing standard that has improved discoverability) and opportunities for a global geochemical data network.

Dr. Kerstin Lehnert and SESAR² participated in PIDapalooza 2019, a conference dedicated to persistent identifiers (PIDs). Dr. Lehnert gave a presentation titled “Transitioning an Identifier System to Persistence” where she discussed the recent Sloan-funded effort to develop a mature organizational and technical structure for the IGSN that is scalable and extensible to other domains, ensuring persistence.

SESAR² participated in the annual assembly of members of the International Implementation Organization for the IGSN (IGSN e.V.). The objective of the IGSN e.V. is to implement and promote standard methods for locating, identifying, and citing physical samples with confidence by operating an international IGSN registration service with a distributed infrastructure for use by and benefit to its members. Membership in the IGSN Implementation Organization is open to organizations who wish to run their own IGSN allocating service.

In this edition we spotlight Nichole Anest and the team at the Lamont-Doherty Core Repository. The Lamont-Doherty Core Repository (LDCR) contains one of the world’s most unique and important collections of scientific samples from the deep sea. Sediment cores from every major ocean and sea are archived at the Core Repository, which contains approximately 72,000 meters of core and associated metadata. Besides their mission to provide long-term curation and archiving of samples and cores, the Core Repository also fulfills sample requests, assists investigators in sample collection activities, and works tirelessly to educate teachers, students, and the public about the important role science and the Core Repository play in building a better understanding of Earth processes.  We caught up with Nichole to learn more about how the Core Repository uses the IGSN and SESAR² to manage their samples, and to explore some of their exciting sample collections. Read more below:

Why do you use SESAR²? We use SESAR² because it makes it possible to track samples through time and publications. I get many students requesting samples that someone used in a paper years to decades ago but the information in the paper about the samples is usually limited or non-existent. So, we have to go back through our paper sampling histories to locate the PI, what core(s) and at what intervals they sampled, and try to piece together what samples’ data were used for the published work. The use of IGSNs makes these sort of sample requests much easier as well as giving “automatic” acknowledgement to the repository where the samples came from.

Sample group highlight: There are about two hundred cores that were taken by the Bureau of Ocean Energy Management (BOEM), part of the US Dept of the Interior, to look for near-shore sand deposits. They wanted to identify where beach sand was transported after major coastal storms (such as Irene and Sandy) and see if it is feasible to use it to replenish the beaches after such storms. Check out the BOEM cores in SESAR² which include core photos as well as grain size data.

The BOEM cores in the Lamont-Doherty Core Repository

SESAR Newsletter | February 2019

The Index to Marine and Lacustrine Geological Samples (IMLGS) that has been developed and maintained by NOAA’s NCEI, has been decommissioned and will no longer be accessible on the NCEI web site starting May 5, 2025. In order to ensure continued access and updates to the IMLGS, SESAR and NCEI have agreed that SESAR will take over stewardship of this resource. SESAR staff is working with NCEI and the marine and lacustrine repository community to ensure persistence of this valuable resource. 

SESAR is planning a phased approach to continuing the services of the IMLGS: 

Phase Ia (completed December 1, 2025): Provide access to the current content of the IMLGS. SESAR will create a user interface for searching the current IMLGS and displaying search results. The priority is to make the contents of the IMLGS accessible again as quickly as possible and minimize downtime after the May 5 shutdown of NCEI-based Interactive Map Tool.

Phase Ib (completed February 10, 2026): SESAR has assumed management of the IMLGS Curators Listserv, previously hosted by NCEI. This listserv is an unmoderated forum for discussion and announcements related to the Curators group and Index to Marine and Lacustrine Geological Samples (IMLGS) database. To join the listserv, request to join here (log in to a Google email account first, or email info@geosamples.org to be manually added to the list): https://groups.google.com/a/geosamples.org/g/imlgs

Phase II (in progress, requires additional funding): Fully integrate the IMLGS services with SESAR. SESAR is starting to work with NCEI and contributing sample repositories to understand their needs and desires for a streamlined data ingest process and user needs for search. Based on these needs and desires, we will generate an implementation plan and try to identify sources of funding to perform the necessary technical developments.

Please note that much of the IMLGS data remains accessible also via GeoMapApp here.

We are grateful for the many notes of support we have received from the community reiterating the importance of the IMLGS resource and expressing gratitude to SESAR for helping to steward this resource in the future. We thank the community for your continued support and patience with this transition. 

If you have questions or comments, please reach out to us at info@geosamples.org.

Notice to the Community Regarding the IMLGS

We are excited to announce the release of our new “Teams” feature, live now in MySESAR. Teams allows multiple users to work on a shared platform within MySESAR, each utilizing their own individual account. This feature was designed to support groups that require multiple members to access and maintain shared sample metadata within their institution. We will be hosting two informational webinars on March 24th and April 3rd to introduce the Teams feature. To sign up, please see the links below:

March 24, 2025 at 11am ET: Register here

April 3, 2025 at 2pm ET: Register here

With the release of the Teams feature, the legacy GeoPass login system will now officially shut down on June 1, 2025. After June 1, 2025, SESAR will solely utilize ORCID validation for login and access to MySESAR. If you have not yet added your ORCID to your account, you can do this by following the steps outlined in our previous newsletter describing the GeoPass Phase out.

Our team is ready to support you during this transition, if you have any concerns or questions please email us at info@geosamples.org.

New Feature Release: Teams Functionality

The following message was sent to SESAR users who are not yet using ORCID to log in to their MySESAR accounts, in anticipation of the shutdown of the legacy IEDA2 GeoPass authentication system in 2025.

Dear SESAR2 GeoPass User,

This message is to inform you that SESAR2 is shutting down its GeoPass login system on January 1st, 2025. You are receiving this message because you have a GeoPass account currently registered with SESAR2. 

After January 1st, 2025, SESAR2 will solely utilize ORCID validation for login and access to MySESAR. ORCID (Open Researcher and Contributor ID) is a free, unique, persistent identifier for individuals. Usage of this internationally-recognized identifier and validation service makes our system safer and easier to access.

ACTION REQUIRED FROM YOU: To ensure undisrupted access and functionality to your SESAR2 account, please login to MySESAR via GeoPass and add your ORCID by December 31st, 2024. You can do this now by:

Registering for an ORCID if you do not have one: https://orcid.org/register

Logging into your SESAR account using GeoPass: https://geopass.iedadata.org/josso/

Under “MyAccount,” add your ORCID. This will allow you to “Login with your ORCID” once GeoPass is no longer available.


For our institutional and web services users, we understand this transition may bring changes that impact your workflow:


For institutional accounts using GeoPass, the primary SESAR2 user from the institution should link their ORCID to the institutional GeoPass. In the coming months we will make changes on the backend that will make it possible to create “Organizations” within SESAR2 and assign and/or transfer sample management permissions to multiple people.

Web Services registrations will begin incorporating ORCID authentication in the coming months. Access through GeoPass will no longer be available after January 1st, 2025.


We are dedicated to helping make this transition as smooth as possible for you. Please email us at info@geosamples.org with any questions or concerns.

Thank you!
The SESAR2 Team

sesar

SESAR² Newsletter | May 2019

New Samples in SESAR²

Tutorials & Help Pages

SESAR² Sample Type Highlights

SESAR² Community

IGSNs in the Literature

Recent Posts